Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.09□□□□□ -0.47
Chd6A3KFM7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.09□□□□□ -0.47
Chd6A3KFM7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC12.09□□□□□ -0.47
Chd6A3KFM7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Gm38341-201ENSMUST00000195357 515 ntBASIC12.09□□□□□ -0.47
Chd6A3KFM7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chd6A3KFM7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Chd6A3KFM7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chd6A3KFM7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Chd6A3KFM7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.08□□□□□ -0.48
Chd6A3KFM7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.08□□□□□ -0.48
Chd6A3KFM7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd6A3KFM7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.07□□□□□ -0.48
Chd6A3KFM7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm6407-201ENSMUST00000176468 549 ntBASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm18307-201ENSMUST00000206864 949 ntBASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.07□□□□□ -0.48
Chd6A3KFM7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.07□□□□□ -0.48
Chd6A3KFM7 Gm19309-201ENSMUST00000218295 205 ntBASIC12.07□□□□□ -0.48
Chd6A3KFM7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd6A3KFM7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.06□□□□□ -0.48
Chd6A3KFM7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd6A3KFM7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms