Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.69□□□□□ -0.38
Col6a4A2AX52 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Mir7085-201ENSMUST00000184353 66 ntBASIC12.69□□□□□ -0.38
Col6a4A2AX52 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm44719-201ENSMUST00000206404 149 ntBASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm9063-201ENSMUST00000223299 582 ntBASIC12.68□□□□□ -0.38
Col6a4A2AX52 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.68□□□□□ -0.38
Col6a4A2AX52 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm29667-201ENSMUST00000190817 490 ntBASIC12.68□□□□□ -0.38
Col6a4A2AX52 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.68□□□□□ -0.38
Col6a4A2AX52 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a4A2AX52 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm14722-201ENSMUST00000118943 689 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm43703-201ENSMUST00000200523 763 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Shd-206ENSMUST00000225145 998 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm25144-201ENSMUST00000179561 110 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Gm25352-201ENSMUST00000179815 110 ntBASIC12.67□□□□□ -0.38
Col6a4A2AX52 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms