Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Thap2-203ENSMUST00000218989 527 ntBASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm11779-201ENSMUST00000118541 368 ntBASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm9385-201ENSMUST00000117563 472 ntBASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms