Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm8825-201ENSMUST00000182565 998 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm4518-201ENSMUST00000182638 718 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv3A0A0A6YYE2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm15039-201ENSMUST00000118914 875 ntBASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm19164-201ENSMUST00000210667 640 ntBASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv3A0A0A6YYE2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms