Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm4899-201ENSMUST00000178708 719 ntBASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbc1A0A0A6YWV4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbc1A0A0A6YWV4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.83□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trbc1A0A0A6YWV4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trbc1A0A0A6YWV4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trbc1A0A0A6YWV4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trbc1A0A0A6YWV4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbc1A0A0A6YWV4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbc1A0A0A6YWV4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms