Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6n-6A0A075B6B2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Rprl3-201ENSMUST00000157400 290 ntBASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6n-6A0A075B6B2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms