Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.98□□□□□ -0.49
Trav17A0A075B655 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav17A0A075B655 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.97□□□□□ -0.49
Trav17A0A075B655 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Gm15565-201ENSMUST00000118890 427 ntBASIC11.97□□□□□ -0.49
Trav17A0A075B655 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.97□□□□□ -0.49
Trav17A0A075B655 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav17A0A075B655 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.96□□□□□ -0.49
Trav17A0A075B655 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Gm8344-201ENSMUST00000119813 856 ntBASIC11.96□□□□□ -0.49
Trav17A0A075B655 Rprl3-201ENSMUST00000157400 290 ntBASIC11.96□□□□□ -0.49
Trav17A0A075B655 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.96□□□□□ -0.49
Trav17A0A075B655 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav17A0A075B655 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.96□□□□□ -0.49
Trav17A0A075B655 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav17A0A075B655 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav17A0A075B655 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms