Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Gm8097-201ENSMUST00000117903 829 ntBASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Gm18669-201ENSMUST00000216049 778 ntBASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-4A0A075B652 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav5-4A0A075B652 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-4A0A075B652 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms