Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav7-6A0A075B640 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Rprl3-201ENSMUST00000157400 290 ntBASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav7-6A0A075B640 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Gm15794-201ENSMUST00000120182 631 ntBASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav7-6A0A075B640 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav7-6A0A075B640 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms