Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8n-2A0A075B633 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Gm27680-201ENSMUST00000184192 160 ntBASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Gm9063-201ENSMUST00000223299 582 ntBASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8n-2A0A075B633 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Gm7488-201ENSMUST00000117148 684 ntBASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Gm27838-201ENSMUST00000184829 128 ntBASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8n-2A0A075B633 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Syt7-205ENSMUST00000224135 1557 ntBASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Gm14719-201ENSMUST00000121891 340 ntBASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Gm16215-201ENSMUST00000161990 637 ntBASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Gm27533-201ENSMUST00000183800 152 ntBASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8n-2A0A075B633 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms