Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Gm13474-201ENSMUST00000122466 815 ntBASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7n-4A0A075B620 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Gm14722-201ENSMUST00000118943 689 ntBASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7n-4A0A075B620 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7n-4A0A075B620 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7n-4A0A075B620 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7n-4A0A075B620 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7n-4A0A075B620 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7n-4A0A075B620 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms