Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm9385-201ENSMUST00000117563 472 ntBASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-1A0A075B5Z7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav5-1A0A075B5Z7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav5-1A0A075B5Z7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm11543-201ENSMUST00000120758 370 ntBASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-1A0A075B5Z7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-1A0A075B5Z7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-1A0A075B5Z7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav5-1A0A075B5Z7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav5-1A0A075B5Z7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms