Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdfS4R2K0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
PdfS4R2K0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
PdfS4R2K0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
PdfS4R2K0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdfS4R2K0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdfS4R2K0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdfS4R2K0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdfS4R2K0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
PdfS4R2K0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdfS4R2K0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.6□□□□□ -0.55
PdfS4R2K0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.6□□□□□ -0.55
PdfS4R2K0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
PdfS4R2K0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PdfS4R2K0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.6□□□□□ -0.55
PdfS4R2K0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.6□□□□□ -0.55
PdfS4R2K0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
PdfS4R2K0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Gm7367-201ENSMUST00000057611 492 ntBASIC11.6□□□□□ -0.55
PdfS4R2K0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
PdfS4R2K0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.6□□□□□ -0.55
PdfS4R2K0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.6□□□□□ -0.55
PdfS4R2K0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdfS4R2K0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PdfS4R2K0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.59□□□□□ -0.55
PdfS4R2K0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
PdfS4R2K0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PdfS4R2K0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
PdfS4R2K0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PdfS4R2K0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.59□□□□□ -0.55
PdfS4R2K0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PdfS4R2K0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.59□□□□□ -0.55
PdfS4R2K0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PdfS4R2K0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
PdfS4R2K0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
PdfS4R2K0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
PdfS4R2K0 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.58□□□□□ -0.56
PdfS4R2K0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PdfS4R2K0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
PdfS4R2K0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
PdfS4R2K0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PdfS4R2K0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.58□□□□□ -0.56
PdfS4R2K0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PdfS4R2K0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PdfS4R2K0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PdfS4R2K0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.58□□□□□ -0.56
PdfS4R2K0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PdfS4R2K0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.58□□□□□ -0.56
PdfS4R2K0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.58□□□□□ -0.56
PdfS4R2K0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.58□□□□□ -0.56
PdfS4R2K0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms