Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim44Q9QXA7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim44Q9QXA7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim44Q9QXA7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim44Q9QXA7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim44Q9QXA7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Gm7791-201ENSMUST00000219066 539 ntBASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Gm18115-201ENSMUST00000221209 621 ntBASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim44Q9QXA7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Trim44Q9QXA7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.38
Trim44Q9QXA7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim44Q9QXA7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms