Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prg4Q9JM99 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Prg4Q9JM99 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prg4Q9JM99 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prg4Q9JM99 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
Prg4Q9JM99 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prg4Q9JM99 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Prg4Q9JM99 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.68□□□□□ -0.22
Prg4Q9JM99 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm25287-201ENSMUST00000103846 110 ntBASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm22918-201ENSMUST00000103855 110 ntBASIC13.68□□□□□ -0.22
Prg4Q9JM99 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm18889-201ENSMUST00000174284 929 ntBASIC13.68□□□□□ -0.22
Prg4Q9JM99 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prg4Q9JM99 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.67□□□□□ -0.22
Prg4Q9JM99 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gm13365-201ENSMUST00000121188 973 ntBASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.67□□□□□ -0.22
Prg4Q9JM99 Mir6990-201ENSMUST00000183724 91 ntBASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prg4Q9JM99 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms