Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1fQ9JIS7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.92■□□□□ 0.3
Cacna1fQ9JIS7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Gm33320-201ENSMUST00000192232 530 ntBASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1fQ9JIS7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Gm45668-201ENSMUST00000211271 493 ntBASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1fQ9JIS7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 Gm20445-201ENSMUST00000061905 565 ntBASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.89■□□□□ 0.3
Cacna1fQ9JIS7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1fQ9JIS7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms