Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm7290-201ENSMUST00000104990 617 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm12918-201ENSMUST00000120234 636 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm15710-201ENSMUST00000121821 636 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm36967-201ENSMUST00000193814 266 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm5075-201ENSMUST00000196916 622 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco4Q9JIS3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms