Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Gm8097-201ENSMUST00000117903 829 ntBASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Gm12644-201ENSMUST00000119935 606 ntBASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl28Q9JIL2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl28Q9JIL2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl28Q9JIL2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms