Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Gm17150-201ENSMUST00000165577 381 ntBASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx2-4Q9EQM3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Gm3436-201ENSMUST00000179930 840 ntBASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx2-4Q9EQM3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gm11425-201ENSMUST00000119608 498 ntBASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 AY702102-202ENSMUST00000194651 1173 ntBASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms