Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Psmb5-202ENSMUST00000227257 622 ntBASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.11■□□□□ 0.01
Vps35Q9EQH3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.11■□□□□ 0.01
Vps35Q9EQH3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps35Q9EQH3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Gm6443-201ENSMUST00000203599 874 ntBASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Vps35Q9EQH3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Gm14140-201ENSMUST00000119999 995 ntBASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Gm18206-201ENSMUST00000207027 926 ntBASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms