Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gm37986-201ENSMUST00000193285 383 ntBASIC16.91■□□□□ 0.3
Upf1Q9EPU0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upf1Q9EPU0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm15460-201ENSMUST00000118147 391 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm15429-201ENSMUST00000151268 798 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm24514-201ENSMUST00000174961 285 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm38002-201ENSMUST00000193255 180 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm43830-201ENSMUST00000198760 1067 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm45098-201ENSMUST00000207179 657 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Gm5161-201ENSMUST00000075243 853 ntBASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upf1Q9EPU0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Upf1Q9EPU0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Gm12997-201ENSMUST00000120207 640 ntBASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Gm38341-201ENSMUST00000195357 515 ntBASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Gm5363-201ENSMUST00000211927 938 ntBASIC16.89■□□□□ 0.29
Upf1Q9EPU0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf1Q9EPU0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms