Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr3Q9DCF9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr3Q9DCF9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr3Q9DCF9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr3Q9DCF9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Gm2274-201ENSMUST00000184539 609 ntBASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr3Q9DCF9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Gm26039-201ENSMUST00000158152 144 ntBASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr3Q9DCF9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms