Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgn3Q9DCB1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm13559-201ENSMUST00000120476 863 ntBASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm7213-201ENSMUST00000215977 950 ntBASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgn3Q9DCB1 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgn3Q9DCB1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Hmgn3Q9DCB1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms