Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1Q9D883 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1Q9D883 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Gm11025-201ENSMUST00000140773 466 ntBASIC19.8■□□□□ 0.76
U2af1Q9D883 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Gm43767-201ENSMUST00000198933 381 ntBASIC19.8■□□□□ 0.76
U2af1Q9D883 Gm45612-201ENSMUST00000211320 160 ntBASIC19.8■□□□□ 0.76
U2af1Q9D883 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
U2af1Q9D883 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.8■□□□□ 0.76
U2af1Q9D883 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
U2af1Q9D883 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1Q9D883 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.79■□□□□ 0.76
U2af1Q9D883 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.79■□□□□ 0.76
U2af1Q9D883 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
U2af1Q9D883 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
U2af1Q9D883 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.79■□□□□ 0.76
U2af1Q9D883 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
U2af1Q9D883 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.79■□□□□ 0.76
U2af1Q9D883 Chchd1-203ENSMUST00000224633 557 ntBASIC19.79■□□□□ 0.76
U2af1Q9D883 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1Q9D883 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
U2af1Q9D883 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
U2af1Q9D883 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
U2af1Q9D883 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.78■□□□□ 0.76
U2af1Q9D883 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.78■□□□□ 0.76
U2af1Q9D883 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.78■□□□□ 0.76
U2af1Q9D883 Gm27494-201ENSMUST00000184735 189 ntBASIC19.78■□□□□ 0.76
U2af1Q9D883 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.78■□□□□ 0.76
U2af1Q9D883 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
U2af1Q9D883 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.78■□□□□ 0.76
U2af1Q9D883 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1Q9D883 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
U2af1Q9D883 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
U2af1Q9D883 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.77■□□□□ 0.76
U2af1Q9D883 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.77■□□□□ 0.76
U2af1Q9D883 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.77■□□□□ 0.76
U2af1Q9D883 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
U2af1Q9D883 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.77■□□□□ 0.76
U2af1Q9D883 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.77■□□□□ 0.76
U2af1Q9D883 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1Q9D883 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
U2af1Q9D883 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
U2af1Q9D883 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
U2af1Q9D883 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
U2af1Q9D883 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms