Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ShpkQ9D5J6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ShpkQ9D5J6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Matn2-206ENSMUST00000228570 2798 ntBASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Gm12933-201ENSMUST00000120203 872 ntBASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ShpkQ9D5J6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ShpkQ9D5J6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ShpkQ9D5J6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ShpkQ9D5J6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
ShpkQ9D5J6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ShpkQ9D5J6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ShpkQ9D5J6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Gm42569-201ENSMUST00000200539 472 ntBASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms