Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Gm7222-201ENSMUST00000117512 906 ntBASIC17.63■□□□□ 0.41
Ccdc7Q9D541 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Gm43347-201ENSMUST00000200226 580 ntBASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc7Q9D541 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc7Q9D541 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Gm7230-201ENSMUST00000173026 815 ntBASIC17.61■□□□□ 0.41
Ccdc7Q9D541 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc7Q9D541 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.6■□□□□ 0.41
Ccdc7Q9D541 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Rps4l-201ENSMUST00000071745 943 ntBASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms