Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy3Q9D394 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy3Q9D394 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy3Q9D394 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy3Q9D394 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy3Q9D394 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Gm7862-201ENSMUST00000121461 292 ntBASIC17.68■□□□□ 0.42
Rufy3Q9D394 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Gm7230-201ENSMUST00000173026 815 ntBASIC17.68■□□□□ 0.42
Rufy3Q9D394 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Rufy3Q9D394 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.67■□□□□ 0.42
Rufy3Q9D394 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Gm15173-201ENSMUST00000122049 433 ntBASIC17.67■□□□□ 0.42
Rufy3Q9D394 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Gm43767-201ENSMUST00000198933 381 ntBASIC17.67■□□□□ 0.42
Rufy3Q9D394 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy3Q9D394 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.66■□□□□ 0.42
Rufy3Q9D394 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Gm6550-201ENSMUST00000187574 993 ntBASIC17.66■□□□□ 0.42
Rufy3Q9D394 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.66■□□□□ 0.42
Rufy3Q9D394 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rufy3Q9D394 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.65■□□□□ 0.42
Rufy3Q9D394 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Gm11764-201ENSMUST00000120221 623 ntBASIC17.65■□□□□ 0.42
Rufy3Q9D394 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.65■□□□□ 0.42
Rufy3Q9D394 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Gm45167-201ENSMUST00000208007 322 ntBASIC17.65■□□□□ 0.42
Rufy3Q9D394 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.65■□□□□ 0.42
Rufy3Q9D394 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.65■□□□□ 0.42
Rufy3Q9D394 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms