Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Gm8318-201ENSMUST00000182954 872 ntBASIC14.31□□□□□ -0.12
Upk1aQ9D132 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Gm18622-201ENSMUST00000219361 595 ntBASIC14.31□□□□□ -0.12
Upk1aQ9D132 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.31□□□□□ -0.12
Upk1aQ9D132 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Gm27742-201ENSMUST00000184667 60 ntBASIC14.3□□□□□ -0.12
Upk1aQ9D132 Gm44454-201ENSMUST00000198541 138 ntBASIC14.3□□□□□ -0.12
Upk1aQ9D132 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.3□□□□□ -0.12
Upk1aQ9D132 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk1aQ9D132 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.29□□□□□ -0.12
Upk1aQ9D132 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.29□□□□□ -0.12
Upk1aQ9D132 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1aQ9D132 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.28□□□□□ -0.12
Upk1aQ9D132 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Rprl3-201ENSMUST00000157400 290 ntBASIC14.28□□□□□ -0.12
Upk1aQ9D132 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Mir7071-201ENSMUST00000184847 69 ntBASIC14.28□□□□□ -0.12
Upk1aQ9D132 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms