Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Gm12134-201ENSMUST00000122109 520 ntBASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Gm25406-201ENSMUST00000157599 105 ntBASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Chaf1bQ9D0N7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm8825-201ENSMUST00000182565 998 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm4518-201ENSMUST00000182638 718 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chaf1bQ9D0N7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.18□□□□□ -0.14
Chaf1bQ9D0N7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Chaf1bQ9D0N7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms