Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Gm16215-201ENSMUST00000161990 637 ntBASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Gm7775-201ENSMUST00000218871 853 ntBASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nip7Q9CXK8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nip7Q9CXK8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nip7Q9CXK8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Syt7-205ENSMUST00000224135 1557 ntBASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Gm7488-201ENSMUST00000117148 684 ntBASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Gm44855-201ENSMUST00000205725 362 ntBASIC18.65■□□□□ 0.58
Nip7Q9CXK8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nip7Q9CXK8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nip7Q9CXK8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms