Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sft2d3Q9CSV6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Gm12260-201ENSMUST00000122447 411 ntBASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Gm2213-201ENSMUST00000197485 688 ntBASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Gm5867-201ENSMUST00000063197 592 ntBASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Sft2d3Q9CSV6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm11764-201ENSMUST00000120221 623 ntBASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm15467-201ENSMUST00000120582 445 ntBASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm37935-201ENSMUST00000192012 982 ntBASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm19164-201ENSMUST00000210667 640 ntBASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sft2d3Q9CSV6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms