Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska1Q9CPV1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Rubie-203ENSMUST00000227803 2430 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm14859-201ENSMUST00000117752 357 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm14722-201ENSMUST00000118943 689 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm7284-201ENSMUST00000131667 944 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm8825-201ENSMUST00000182565 998 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm4518-201ENSMUST00000182638 718 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms