Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.16■□□□□ 0.02
Cdh23Q99PF4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh23Q99PF4 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.15■□□□□ 0.02
Cdh23Q99PF4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Gm27631-201ENSMUST00000184163 466 ntBASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh23Q99PF4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Gm27839-201ENSMUST00000184242 106 ntBASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh23Q99PF4 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.13■□□□□ 0.01
Cdh23Q99PF4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms