Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tlr3Q99MB1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tlr3Q99MB1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.16■□□□□ 0.18
Tlr3Q99MB1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Gm14822-201ENSMUST00000122247 291 ntBASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Gm18246-201ENSMUST00000221023 728 ntBASIC16.16■□□□□ 0.18
Tlr3Q99MB1 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tlr3Q99MB1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms