Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdca3Q99M54 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdca3Q99M54 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.02□□□□□ -0.17
Cdca3Q99M54 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdca3Q99M54 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cdca3Q99M54 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.01□□□□□ -0.17
Cdca3Q99M54 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cdca3Q99M54 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Gm17271-201ENSMUST00000165535 355 ntBASIC14.01□□□□□ -0.17
Cdca3Q99M54 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdca3Q99M54 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14□□□□□ -0.17
Cdca3Q99M54 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdca3Q99M54 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdca3Q99M54 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Gm11025-201ENSMUST00000140773 466 ntBASIC14□□□□□ -0.17
Cdca3Q99M54 Gm25406-201ENSMUST00000157599 105 ntBASIC14□□□□□ -0.17
Cdca3Q99M54 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14□□□□□ -0.17
Cdca3Q99M54 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14□□□□□ -0.17
Cdca3Q99M54 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdca3Q99M54 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdca3Q99M54 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdca3Q99M54 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cdca3Q99M54 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Gm11839-201ENSMUST00000120647 1953 ntBASIC14□□□□□ -0.17
Cdca3Q99M54 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdca3Q99M54 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdca3Q99M54 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdca3Q99M54 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cdca3Q99M54 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdca3Q99M54 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdca3Q99M54 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdca3Q99M54 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdca3Q99M54 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdca3Q99M54 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms