Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.59□□□□□ -0.07
Cstf3Q99LI7 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cstf3Q99LI7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.58□□□□□ -0.07
Cstf3Q99LI7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44357-201ENSMUST00000195897 142 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm19658-201ENSMUST00000196231 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44367-201ENSMUST00000196836 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44350-201ENSMUST00000197197 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44390-201ENSMUST00000197533 144 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44313-201ENSMUST00000198018 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44486-201ENSMUST00000198508 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44314-201ENSMUST00000199263 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44394-201ENSMUST00000199558 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44484-201ENSMUST00000199873 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44466-201ENSMUST00000200264 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm44359-201ENSMUST00000200671 138 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.58□□□□□ -0.08
Cstf3Q99LI7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Gm13418-201ENSMUST00000119097 944 ntBASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Gm43347-201ENSMUST00000200226 580 ntBASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Birc2-201ENSMUST00000054878 378 ntBASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cstf3Q99LI7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms