Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Gm25406-201ENSMUST00000157599 105 ntBASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1aQ921W0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Gm43799-201ENSMUST00000201845 579 ntBASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1aQ921W0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms