Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Gm8749-201ENSMUST00000117737 331 ntBASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm29310-201ENSMUST00000185468 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21825-201ENSMUST00000185728 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm29109-201ENSMUST00000185895 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21896-201ENSMUST00000186520 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21873-201ENSMUST00000186728 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21794-201ENSMUST00000187056 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21880-201ENSMUST00000187275 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21826-201ENSMUST00000187451 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21198-201ENSMUST00000188393 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21749-201ENSMUST00000189343 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21901-201ENSMUST00000189568 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm29424-201ENSMUST00000189716 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm28599-201ENSMUST00000189838 694 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21867-201ENSMUST00000189917 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm29269-201ENSMUST00000190087 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21722-201ENSMUST00000190153 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm28423-201ENSMUST00000190701 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21899-201ENSMUST00000190745 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21910-201ENSMUST00000191163 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21849-201ENSMUST00000191571 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm28678-201ENSMUST00000191593 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm20910-201ENSMUST00000193268 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm21871-201ENSMUST00000194621 696 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm2451-201ENSMUST00000199447 999 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Gm10290-201ENSMUST00000200451 999 ntBASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3b3Q921M3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sf3b3Q921M3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sf3b3Q921M3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sf3b3Q921M3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sf3b3Q921M3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sf3b3Q921M3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Gm15321-201ENSMUST00000121290 288 ntBASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Gm16215-201ENSMUST00000161990 637 ntBASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.01■□□□□ 0.47
Sf3b3Q921M3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3b3Q921M3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3b3Q921M3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms