Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.4■□□□□ 0.38
Smc1bQ920F6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Smc1bQ920F6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smc1bQ920F6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Smc1bQ920F6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smc1bQ920F6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.39■□□□□ 0.37
Smc1bQ920F6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Gm43474-201ENSMUST00000196415 774 ntBASIC17.39■□□□□ 0.37
Smc1bQ920F6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.39■□□□□ 0.37
Smc1bQ920F6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.39■□□□□ 0.37
Smc1bQ920F6 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.39■□□□□ 0.37
Smc1bQ920F6 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.39■□□□□ 0.37
Smc1bQ920F6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.39■□□□□ 0.37
Smc1bQ920F6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smc1bQ920F6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.38■□□□□ 0.37
Smc1bQ920F6 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.38■□□□□ 0.37
Smc1bQ920F6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Smc1bQ920F6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.37■□□□□ 0.37
Smc1bQ920F6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.37■□□□□ 0.37
Smc1bQ920F6 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.37■□□□□ 0.37
Smc1bQ920F6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.37■□□□□ 0.37
Smc1bQ920F6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Rprl2-201ENSMUST00000157150 290 ntBASIC17.36■□□□□ 0.37
Smc1bQ920F6 Gm23547-201ENSMUST00000158210 271 ntBASIC17.36■□□□□ 0.37
Smc1bQ920F6 Gm22175-201ENSMUST00000175007 78 ntBASIC17.36■□□□□ 0.37
Smc1bQ920F6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.36■□□□□ 0.37
Smc1bQ920F6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.36■□□□□ 0.37
Smc1bQ920F6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms