Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Gm11779-201ENSMUST00000118541 368 ntBASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Gm15467-201ENSMUST00000120582 445 ntBASIC16■□□□□ 0.15
Pcdha9Q91Y11 Gm15593-201ENSMUST00000122085 1008 ntBASIC16■□□□□ 0.15
Pcdha9Q91Y11 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 AC174742.1-201ENSMUST00000218272 304 ntBASIC16■□□□□ 0.15
Pcdha9Q91Y11 Thap2-203ENSMUST00000218989 527 ntBASIC16■□□□□ 0.15
Pcdha9Q91Y11 AC090659.1-201ENSMUST00000224334 768 ntBASIC16■□□□□ 0.15
Pcdha9Q91Y11 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha9Q91Y11 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdha9Q91Y11 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Gm17968-201ENSMUST00000194902 784 ntBASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms