Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb6Q91XZ4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Mzt1-203ENSMUST00000227948 952 ntBASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb6Q91XZ4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb6Q91XZ4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
Pcdhb6Q91XZ4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhb6Q91XZ4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb6Q91XZ4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb6Q91XZ4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb6Q91XZ4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb6Q91XZ4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb6Q91XZ4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb6Q91XZ4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb6Q91XZ4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb6Q91XZ4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb6Q91XZ4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms