Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm27306-201ENSMUST00000183970 107 ntBASIC17.22■□□□□ 0.35
Trex1Q91XB0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.22■□□□□ 0.35
Trex1Q91XB0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.21■□□□□ 0.35
Trex1Q91XB0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trex1Q91XB0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.21■□□□□ 0.35
Trex1Q91XB0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gm28630-201ENSMUST00000187806 498 ntBASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gm18766-201ENSMUST00000189811 808 ntBASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gm6888-201ENSMUST00000221983 706 ntBASIC17.21■□□□□ 0.35
Trex1Q91XB0 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.21■□□□□ 0.35
Trex1Q91XB0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trex1Q91XB0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Trex1Q91XB0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trex1Q91XB0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trex1Q91XB0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.2■□□□□ 0.34
Trex1Q91XB0 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.2■□□□□ 0.34
Trex1Q91XB0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.2■□□□□ 0.34
Trex1Q91XB0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trex1Q91XB0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Gm13453-201ENSMUST00000118708 357 ntBASIC17.19■□□□□ 0.34
Trex1Q91XB0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Mir6977-201ENSMUST00000184960 64 ntBASIC17.19■□□□□ 0.34
Trex1Q91XB0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.19■□□□□ 0.34
Trex1Q91XB0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms