Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H1fooQ8VIK3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.65□□□□□ -0.38
H1fooQ8VIK3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
H1fooQ8VIK3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
H1fooQ8VIK3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Gm24589-201ENSMUST00000116692 94 ntBASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.64□□□□□ -0.39
H1fooQ8VIK3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
H1fooQ8VIK3 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm6089-201ENSMUST00000197666 938 ntBASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H1fooQ8VIK3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Gm25990-201ENSMUST00000102440 86 ntBASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Gm10499-201ENSMUST00000174094 934 ntBASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms