Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rab40cQ8VHQ4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm8825-201ENSMUST00000182565 998 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm4518-201ENSMUST00000182638 718 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab40cQ8VHQ4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Gm23547-201ENSMUST00000158210 271 ntBASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Gm22697-201ENSMUST00000175194 63 ntBASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab40cQ8VHQ4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms