Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpa1Q8VEE4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa1Q8VEE4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa1Q8VEE4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa1Q8VEE4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.21■□□□□ 0.02
Rpa1Q8VEE4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa1Q8VEE4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpa1Q8VEE4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Gm14722-201ENSMUST00000118943 689 ntBASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpa1Q8VEE4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
Rpa1Q8VEE4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms