Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm12134-201ENSMUST00000122109 520 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44357-201ENSMUST00000195897 142 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm19658-201ENSMUST00000196231 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44367-201ENSMUST00000196836 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44350-201ENSMUST00000197197 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44390-201ENSMUST00000197533 144 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44313-201ENSMUST00000198018 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44486-201ENSMUST00000198508 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44314-201ENSMUST00000199263 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44394-201ENSMUST00000199558 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44484-201ENSMUST00000199873 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44466-201ENSMUST00000200264 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Gm44359-201ENSMUST00000200671 138 ntBASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm1Q8VC85 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm1Q8VC85 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm1Q8VC85 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm1Q8VC85 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm1Q8VC85 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm1Q8VC85 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Gm13418-201ENSMUST00000119097 944 ntBASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Ank2-226ENSMUST00000189368 339 ntBASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.45□□□□□ -0.1
Lsm1Q8VC85 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms