Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.03■□□□□ 0.48
Top1mtQ8R4U6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Top1mtQ8R4U6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Top1mtQ8R4U6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Top1mtQ8R4U6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Top1mtQ8R4U6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Top1mtQ8R4U6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Top1mtQ8R4U6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Top1mtQ8R4U6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Top1mtQ8R4U6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Top1mtQ8R4U6 Gm13294-201ENSMUST00000121757 1330 ntBASIC18■□□□□ 0.47
Top1mtQ8R4U6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Gm27300-201ENSMUST00000184085 97 ntBASIC18■□□□□ 0.47
Top1mtQ8R4U6 Gm27335-201ENSMUST00000184758 97 ntBASIC18■□□□□ 0.47
Top1mtQ8R4U6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18■□□□□ 0.47
Top1mtQ8R4U6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18■□□□□ 0.47
Top1mtQ8R4U6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18■□□□□ 0.47
Top1mtQ8R4U6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Gm43598-201ENSMUST00000202482 2479 ntBASIC18■□□□□ 0.47
Top1mtQ8R4U6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Top1mtQ8R4U6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms