Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cd109Q8R422 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC21.22■□□□□ 0.99
Cd109Q8R422 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd109Q8R422 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC21.21■□□□□ 0.99
Cd109Q8R422 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm16215-201ENSMUST00000161990 637 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cd109Q8R422 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cd109Q8R422 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cd109Q8R422 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm7488-201ENSMUST00000117148 684 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm8749-201ENSMUST00000117737 331 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm6222-201ENSMUST00000120787 396 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm15321-201ENSMUST00000121290 288 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm24694-201ENSMUST00000180054 110 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm27838-201ENSMUST00000184829 128 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm27663-201ENSMUST00000184839 110 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm44855-201ENSMUST00000205725 362 ntBASIC21.21■□□□□ 0.99
Cd109Q8R422 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC21.21■□□□□ 0.99
Cd109Q8R422 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd109Q8R422 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC21.2■□□□□ 0.98
Cd109Q8R422 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd109Q8R422 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd109Q8R422 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd109Q8R422 Trav13-3-201ENSMUST00000117226 336 ntBASIC21.2■□□□□ 0.98
Cd109Q8R422 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Cd109Q8R422 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cd109Q8R422 Gm16476-201ENSMUST00000221544 139 ntBASIC21.2■□□□□ 0.98
Cd109Q8R422 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd109Q8R422 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd109Q8R422 Gm44616-201ENSMUST00000206417 1732 ntBASIC21.2■□□□□ 0.98
Cd109Q8R422 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cd109Q8R422 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Cd109Q8R422 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 Gm37230-201ENSMUST00000194491 818 ntBASIC21.19■□□□□ 0.98
Cd109Q8R422 Olfr286-202ENSMUST00000205305 969 ntBASIC21.19■□□□□ 0.98
Cd109Q8R422 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd109Q8R422 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC21.18■□□□□ 0.98
Cd109Q8R422 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cd109Q8R422 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC21.18■□□□□ 0.98
Cd109Q8R422 Gm5745-201ENSMUST00000183748 313 ntBASIC21.18■□□□□ 0.98
Cd109Q8R422 Gm6473-201ENSMUST00000188572 1210 ntBASIC21.18■□□□□ 0.98
Cd109Q8R422 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC21.18■□□□□ 0.98
Cd109Q8R422 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.18■□□□□ 0.98
Cd109Q8R422 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd109Q8R422 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cd109Q8R422 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.17■□□□□ 0.98
Cd109Q8R422 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Gm5320-201ENSMUST00000207163 1519 ntBASIC21.17■□□□□ 0.98
Cd109Q8R422 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC21.17■□□□□ 0.98
Cd109Q8R422 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 AC124732.1-201ENSMUST00000221551 910 ntBASIC21.17■□□□□ 0.98
Cd109Q8R422 AC149588.3-201ENSMUST00000227515 150 ntBASIC21.17■□□□□ 0.98
Cd109Q8R422 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms