Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Gm15321-201ENSMUST00000121290 288 ntBASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vopp1Q8R1C3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vopp1Q8R1C3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vopp1Q8R1C3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
Vopp1Q8R1C3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vopp1Q8R1C3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Vopp1Q8R1C3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Mir6977-201ENSMUST00000184960 64 ntBASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vopp1Q8R1C3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Dupd1-202ENSMUST00000224735 548 ntBASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.82■□□□□ 0.12
Vopp1Q8R1C3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vopp1Q8R1C3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms