Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.8■□□□□ 0.44
Atf7Q8R0S1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf7Q8R0S1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Gm2651-201ENSMUST00000203560 838 ntBASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf7Q8R0S1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Gm27300-201ENSMUST00000184085 97 ntBASIC17.77■□□□□ 0.44
Atf7Q8R0S1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Gm27335-201ENSMUST00000184758 97 ntBASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Gm27741-201ENSMUST00000185060 237 ntBASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf7Q8R0S1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
Atf7Q8R0S1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atf7Q8R0S1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atf7Q8R0S1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atf7Q8R0S1 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.77■□□□□ 0.43
Atf7Q8R0S1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.76■□□□□ 0.43
Atf7Q8R0S1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.76■□□□□ 0.43
Atf7Q8R0S1 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf7Q8R0S1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms